Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav3n-3A0A0G2JEM0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav3n-3A0A0G2JEM0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3n-3A0A0G2JEM0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav3n-3A0A0G2JEM0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3n-3A0A0G2JEM0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3n-3A0A0G2JEM0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms