Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav19A0A0B4J1K4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav19A0A0B4J1K4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav19A0A0B4J1K4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav19A0A0B4J1K4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav19A0A0B4J1K4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav19A0A0B4J1K4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Gm10420-201ENSMUST00000121713 882 ntBASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav19A0A0B4J1K4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav19A0A0B4J1K4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav19A0A0B4J1K4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav19A0A0B4J1K4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav19A0A0B4J1K4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms