Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Trbv19A0A0B4J1H4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv19A0A0B4J1H4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv19A0A0B4J1H4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv19A0A0B4J1H4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv19A0A0B4J1H4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv19A0A0B4J1H4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv19A0A0B4J1H4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv19A0A0B4J1H4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv19A0A0B4J1H4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Gm7143-201ENSMUST00000222811 859 ntBASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv19A0A0B4J1H4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv19A0A0B4J1H4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv19A0A0B4J1H4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.1■□□□□ 0.17
Trbv19A0A0B4J1H4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv19A0A0B4J1H4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv19A0A0B4J1H4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv19A0A0B4J1H4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trbv19A0A0B4J1H4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv19A0A0B4J1H4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv19A0A0B4J1H4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv19A0A0B4J1H4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.08■□□□□ 0.16
Trbv19A0A0B4J1H4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm15820-201ENSMUST00000201566 728 ntBASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv19A0A0B4J1H4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms