Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm21956-201ENSMUST00000179946 522 ntBASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms