Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BC053393A0A0B4J1F6 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC053393A0A0B4J1F6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC053393A0A0B4J1F6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.03■□□□□ 0.16
BC053393A0A0B4J1F6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC053393A0A0B4J1F6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC053393A0A0B4J1F6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC053393A0A0B4J1F6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BC053393A0A0B4J1F6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BC053393A0A0B4J1F6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms