Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-42A0A0A6YY38 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-42A0A0A6YY38 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-42A0A0A6YY38 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm10493-201ENSMUST00000097270 612 ntBASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-42A0A0A6YY38 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-42A0A0A6YY38 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-42A0A0A6YY38 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-42A0A0A6YY38 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-42A0A0A6YY38 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-42A0A0A6YY38 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-42A0A0A6YY38 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-42A0A0A6YY38 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-42A0A0A6YY38 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-42A0A0A6YY38 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.6■□□□□ 0.57
Ighv1-42A0A0A6YY38 Gm11421-201ENSMUST00000122124 294 ntBASIC18.6■□□□□ 0.57
Ighv1-42A0A0A6YY38 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-42A0A0A6YY38 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.6■□□□□ 0.57
Ighv1-42A0A0A6YY38 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Ighv1-42A0A0A6YY38 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms