Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv16-1A0A0A6YW39 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv16-1A0A0A6YW39 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv16-1A0A0A6YW39 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv16-1A0A0A6YW39 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv16-1A0A0A6YW39 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv16-1A0A0A6YW39 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ighv16-1A0A0A6YW39 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv16-1A0A0A6YW39 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv16-1A0A0A6YW39 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ighv16-1A0A0A6YW39 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.52■□□□□ 0.56
Ighv16-1A0A0A6YW39 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv16-1A0A0A6YW39 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv16-1A0A0A6YW39 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv16-1A0A0A6YW39 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv16-1A0A0A6YW39 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ighv16-1A0A0A6YW39 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv16-1A0A0A6YW39 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv16-1A0A0A6YW39 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms