Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-6A0A075B6B2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm43566-201ENSMUST00000196851 808 ntBASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-6A0A075B6B2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-6A0A075B6B2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-6A0A075B6B2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6n-6A0A075B6B2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.83□□□□□ -0.03
Trav6n-6A0A075B6B2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trav6n-6A0A075B6B2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6n-6A0A075B6B2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6n-6A0A075B6B2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6n-6A0A075B6B2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms