Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav16A0A075B653 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.48■□□□□ 0.07
Trav16A0A075B653 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16A0A075B653 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav16A0A075B653 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16A0A075B653 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav16A0A075B653 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16A0A075B653 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16A0A075B653 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav16A0A075B653 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16A0A075B653 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trav16A0A075B653 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trav16A0A075B653 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16A0A075B653 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav16A0A075B653 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav16A0A075B653 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav16A0A075B653 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.41■□□□□ 0.06
Trav16A0A075B653 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.4■□□□□ 0.06
Trav16A0A075B653 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms