Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-2A0A075B649 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-2A0A075B649 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-2A0A075B649 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-2A0A075B649 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav13-2A0A075B649 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-2A0A075B649 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-2A0A075B649 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-2A0A075B649 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav13-2A0A075B649 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav13-2A0A075B649 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Gm14523-201ENSMUST00000117260 558 ntBASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13-2A0A075B649 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms