Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-3A0A075B645 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav14n-3A0A075B645 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-3A0A075B645 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trav14n-3A0A075B645 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav14n-3A0A075B645 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14n-3A0A075B645 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav14n-3A0A075B645 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Gm11599-201ENSMUST00000118720 878 ntBASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Gm7432-201ENSMUST00000210343 879 ntBASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14n-3A0A075B645 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14n-3A0A075B645 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14n-3A0A075B645 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14n-3A0A075B645 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav14n-3A0A075B645 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-3A0A075B645 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms