Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Terc-201ENSMUST00000082862 423 ntBASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Gm8503-201ENSMUST00000118131 455 ntBASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8-1A0A075B641 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8-1A0A075B641 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8-1A0A075B641 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8-1A0A075B641 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8-1A0A075B641 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms