Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16d-dv11A0A075B617 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16d-dv11A0A075B617 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav16d-dv11A0A075B617 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16d-dv11A0A075B617 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16d-dv11A0A075B617 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Gm11599-201ENSMUST00000118720 878 ntBASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Gm7432-201ENSMUST00000210343 879 ntBASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16d-dv11A0A075B617 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16d-dv11A0A075B617 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.71□□□□□ -0.06
Trav16d-dv11A0A075B617 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16d-dv11A0A075B617 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms