Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4n-4A0A075B615 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4n-4A0A075B615 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4n-4A0A075B615 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4n-4A0A075B615 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4n-4A0A075B615 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4n-4A0A075B615 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4n-4A0A075B615 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4n-4A0A075B615 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4n-4A0A075B615 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav4n-4A0A075B615 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4n-4A0A075B615 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4n-4A0A075B615 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Tdp2-203ENSMUST00000223804 1136 ntBASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Golph3-205ENSMUST00000228671 2842 ntBASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav4n-4A0A075B615 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4n-4A0A075B615 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms