Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav7n-5A0A075B604 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-5A0A075B604 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-5A0A075B604 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav7n-5A0A075B604 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-5A0A075B604 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-5A0A075B604 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-5A0A075B604 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-5A0A075B604 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-5A0A075B604 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-5A0A075B604 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-5A0A075B604 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-5A0A075B604 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav7n-5A0A075B604 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav7n-5A0A075B604 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-5A0A075B604 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav7n-5A0A075B604 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav7n-5A0A075B604 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms