Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
U2af1Q9D883 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm14213-201ENSMUST00000119778 768 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm26119-201ENSMUST00000175601 104 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm7255-201ENSMUST00000187371 908 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm35713-201ENSMUST00000210516 199 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm6390-201ENSMUST00000215034 589 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.39□□□□□ -0.11
U2af1Q9D883 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
U2af1Q9D883 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
U2af1Q9D883 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm9372-201ENSMUST00000168454 430 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.38□□□□□ -0.11
U2af1Q9D883 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm7536-201ENSMUST00000077389 444 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm25125-201ENSMUST00000083340 136 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm9035-201ENSMUST00000218318 1697 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Hyal2-206ENSMUST00000195681 2968 ntBASIC14.38□□□□□ -0.11
U2af1Q9D883 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
U2af1Q9D883 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
U2af1Q9D883 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm25880-201ENSMUST00000104331 132 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm14234-201ENSMUST00000119539 845 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms