Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chmp4cQ9D7F7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 AC160340.2-201ENSMUST00000220812 3675 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm4294-201ENSMUST00000105169 614 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Mir6546-201ENSMUST00000184460 62 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC13.11□□□□□ -0.31
Chmp4cQ9D7F7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm11949-201ENSMUST00000117640 372 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm20426-201ENSMUST00000173657 440 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm10731-201ENSMUST00000181171 448 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm37826-201ENSMUST00000195329 322 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Spcs1-203ENSMUST00000226374 592 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm5468-202ENSMUST00000227851 682 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp4cQ9D7F7 Gm3372-201ENSMUST00000198806 1792 ntBASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp4cQ9D7F7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms