Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm25116-201ENSMUST00000157191 122 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm8459-201ENSMUST00000162504 760 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm3332-201ENSMUST00000189337 928 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm44967-201ENSMUST00000207047 631 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 AA474408-201ENSMUST00000098110 3339 ntBASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim13Q9CYB0 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms