Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm23612-201ENSMUST00000103823 110 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm25562-201ENSMUST00000104608 133 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm13981-201ENSMUST00000122360 447 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm23576-201ENSMUST00000179918 110 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm37284-201ENSMUST00000193607 539 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.68□□□□□ -0.86
Scrt1Q99M85 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Scrt1Q99M85 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Scrt1Q99M85 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms