Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm10774-201ENSMUST00000188689 204 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.02□□□□□ -0.81
Lims1Q99JW4 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lims1Q99JW4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm12337-201ENSMUST00000119634 400 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm11836-201ENSMUST00000121022 441 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Ginm1-202ENSMUST00000065124 300 ntBASIC10.01□□□□□ -0.81
Lims1Q99JW4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lims1Q99JW4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Lims1Q99JW4 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10□□□□□ -0.81
Lims1Q99JW4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10□□□□□ -0.81
Lims1Q99JW4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lims1Q99JW4 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Lims1Q99JW4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lims1Q99JW4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Lims1Q99JW4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms