Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm5451-201ENSMUST00000080545 579 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm12419-201ENSMUST00000116649 636 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ginm1-202ENSMUST00000065124 300 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.34□□□□□ -0.59
Trim60Q8VI40 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim60Q8VI40 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm11836-201ENSMUST00000121022 441 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm18042-201ENSMUST00000219887 790 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim60Q8VI40 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.33□□□□□ -0.6
Trim60Q8VI40 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms