Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.2□□□□□ -0.78
H2afjQ8R1M2 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
H2afjQ8R1M2 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afjQ8R1M2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afjQ8R1M2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afjQ8R1M2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm15549-201ENSMUST00000121595 622 ntBASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm9540-201ENSMUST00000188230 478 ntBASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm5363-201ENSMUST00000211927 938 ntBASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm9257-201ENSMUST00000221254 232 ntBASIC10.19□□□□□ -0.78
H2afjQ8R1M2 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afjQ8R1M2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm22920-201ENSMUST00000102175 109 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm12997-201ENSMUST00000120207 640 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm9089-201ENSMUST00000122027 526 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm24844-201ENSMUST00000158679 127 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm37284-201ENSMUST00000193607 539 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Spata33-207ENSMUST00000212760 4074 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
H2afjQ8R1M2 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afjQ8R1M2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms