Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm14395-201ENSMUST00000120494 563 ntBASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup88Q8CEC0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.96□□□□□ -0.34
Nup88Q8CEC0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm4294-201ENSMUST00000105169 614 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm37826-201ENSMUST00000195329 322 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm9139-201ENSMUST00000218817 700 ntBASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup88Q8CEC0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm12247-201ENSMUST00000117585 670 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms