Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Lysmd4Q8CC84 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm12501-201ENSMUST00000119163 529 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Platr10-202ENSMUST00000191479 818 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lysmd4Q8CC84 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.79□□□□□ -0.84
Lysmd4Q8CC84 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms