Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm22711-201ENSMUST00000116890 133 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm15515-201ENSMUST00000117827 822 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm25492-201ENSMUST00000157383 129 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm5865-201ENSMUST00000198713 637 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm7783-201ENSMUST00000204795 781 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm6082-201ENSMUST00000215204 454 ntBASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Scaf4Q6PFF0 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm18730-201ENSMUST00000218038 343 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Olfr584-201ENSMUST00000098210 964 ntBASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scaf4Q6PFF0 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm14193-201ENSMUST00000105067 153 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm8302-201ENSMUST00000119217 852 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm18367-201ENSMUST00000176139 600 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms