Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Casc4Q6P2L7 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Casc4Q6P2L7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Casc4Q6P2L7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.15□□□□□ -0.63
Casc4Q6P2L7 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Casc4Q6P2L7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm13937-201ENSMUST00000121000 988 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm8531-201ENSMUST00000188319 893 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm43380-201ENSMUST00000200421 220 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Casc4Q6P2L7 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm12899-201ENSMUST00000120565 551 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms