Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.47□□□□□ -0.41
Gm28047Q3US59 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28047Q3US59 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Spata33-207ENSMUST00000212760 4074 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm12663-201ENSMUST00000118481 958 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm15197-201ENSMUST00000120526 478 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 B9d1os-201ENSMUST00000137010 674 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm16165-201ENSMUST00000160140 795 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm6485-201ENSMUST00000160676 439 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm40414-201ENSMUST00000197608 481 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Id2-203ENSMUST00000222667 958 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.46□□□□□ -0.41
Gm28047Q3US59 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm28047Q3US59 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28047Q3US59 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm13611-201ENSMUST00000118269 318 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm11331-201ENSMUST00000119764 288 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm3828-201ENSMUST00000121817 257 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Mir7070-201ENSMUST00000183657 86 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.45□□□□□ -0.42
Gm28047Q3US59 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms