Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GabpaQ00422 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
GabpaQ00422 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GabpaQ00422 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GabpaQ00422 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GabpaQ00422 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.46□□□□□ -0.42
GabpaQ00422 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.46□□□□□ -0.42
GabpaQ00422 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
GabpaQ00422 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GabpaQ00422 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
GabpaQ00422 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GabpaQ00422 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GabpaQ00422 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GabpaQ00422 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
GabpaQ00422 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
GabpaQ00422 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm9625-201ENSMUST00000180422 955 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Gm43097-201ENSMUST00000196867 151 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.45□□□□□ -0.42
GabpaQ00422 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm6478-201ENSMUST00000099450 742 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GabpaQ00422 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GabpaQ00422 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.45□□□□□ -0.42
GabpaQ00422 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.44□□□□□ -0.42
GabpaQ00422 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.44□□□□□ -0.42
GabpaQ00422 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.44□□□□□ -0.42
GabpaQ00422 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
GabpaQ00422 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.44□□□□□ -0.42
GabpaQ00422 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.44□□□□□ -0.42
GabpaQ00422 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.44□□□□□ -0.42
GabpaQ00422 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GabpaQ00422 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GabpaQ00422 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GabpaQ00422 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GabpaQ00422 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.43□□□□□ -0.42
GabpaQ00422 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GabpaQ00422 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms