Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Cacna1aP97445 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cacna1aP97445 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC10.19□□□□□ -0.78
Cacna1aP97445 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Mir6387-201ENSMUST00000184042 108 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Cacna1aP97445 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.19□□□□□ -0.78
Cacna1aP97445 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cacna1aP97445 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm8643-201ENSMUST00000195228 625 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm6478-201ENSMUST00000099450 742 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms