Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-3P97334 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 Gm42521-201ENSMUST00000199190 2040 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.77□□□□□ -0.21
Nkx2-3P97334 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-3P97334 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm6755-201ENSMUST00000100598 864 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm6740-201ENSMUST00000100617 864 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Mir291b-201ENSMUST00000104838 79 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm14542-201ENSMUST00000118460 1248 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm12337-201ENSMUST00000119634 400 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm6546-201ENSMUST00000192096 766 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm44420-201ENSMUST00000203669 490 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.76□□□□□ -0.21
Nkx2-3P97334 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-3P97334 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.75□□□□□ -0.21
Nkx2-3P97334 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nkx2-3P97334 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms