Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.89□□□□□ -0.83
SgcbP82349 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SgcbP82349 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Gm14807-201ENSMUST00000116640 983 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gm14270-201ENSMUST00000118388 846 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gm12986-201ENSMUST00000119037 967 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gm13937-201ENSMUST00000121000 988 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SgcbP82349 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Gm8920-201ENSMUST00000196153 924 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.88□□□□□ -0.83
SgcbP82349 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Gm30671-201ENSMUST00000214898 318 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gm9139-201ENSMUST00000218817 700 ntBASIC9.88□□□□□ -0.83
SgcbP82349 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.88□□□□□ -0.83
SgcbP82349 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.88□□□□□ -0.83
SgcbP82349 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.88□□□□□ -0.83
SgcbP82349 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
SgcbP82349 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.87□□□□□ -0.83
SgcbP82349 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
SgcbP82349 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SgcbP82349 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SgcbP82349 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Gm25063-201ENSMUST00000104666 94 ntBASIC9.87□□□□□ -0.83
SgcbP82349 Mir453-201ENSMUST00000104732 82 ntBASIC9.87□□□□□ -0.83
SgcbP82349 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SgcbP82349 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
SgcbP82349 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SgcbP82349 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.87□□□□□ -0.83
SgcbP82349 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.87□□□□□ -0.83
SgcbP82349 Gm12899-201ENSMUST00000120565 551 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms