Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Lsm6P62313 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.65□□□□□ -0.86
Lsm6P62313 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm23771-201ENSMUST00000178702 110 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm7985-201ENSMUST00000183329 981 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm28746-201ENSMUST00000187453 380 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm43163-201ENSMUST00000196571 442 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm43138-201ENSMUST00000199123 708 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.65□□□□□ -0.86
Lsm6P62313 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Lsm6P62313 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Lsm6P62313 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.65□□□□□ -0.87
Lsm6P62313 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm6P62313 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.65□□□□□ -0.87
Lsm6P62313 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.64□□□□□ -0.87
Lsm6P62313 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm27910-201ENSMUST00000185004 107 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm38321-201ENSMUST00000195053 235 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.64□□□□□ -0.87
Lsm6P62313 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.64□□□□□ -0.87
Lsm6P62313 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm6P62313 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Lsm6P62313 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm6P62313 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.64□□□□□ -0.87
Lsm6P62313 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms