Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.35□□□□□ -0.43
Rrp1P56183 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.35□□□□□ -0.43
Rrp1P56183 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.35□□□□□ -0.43
Rrp1P56183 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.35□□□□□ -0.43
Rrp1P56183 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.35□□□□□ -0.43
Rrp1P56183 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.35□□□□□ -0.43
Rrp1P56183 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.35□□□□□ -0.43
Rrp1P56183 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.35□□□□□ -0.43
Rrp1P56183 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp1P56183 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.34□□□□□ -0.43
Rrp1P56183 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.34□□□□□ -0.43
Rrp1P56183 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.34□□□□□ -0.43
Rrp1P56183 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Gm10020-201ENSMUST00000081993 612 ntBASIC12.34□□□□□ -0.43
Rrp1P56183 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rrp1P56183 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Rrp1P56183 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.34□□□□□ -0.43
Rrp1P56183 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Rrp1P56183 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.34□□□□□ -0.43
Rrp1P56183 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp1P56183 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rrp1P56183 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rrp1P56183 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 Gm23251-201ENSMUST00000103773 110 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.33□□□□□ -0.44
Rrp1P56183 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.33□□□□□ -0.44
Rrp1P56183 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm18042-201ENSMUST00000219887 790 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms