Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Gm23908-201ENSMUST00000104599 132 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox1P53783 Gm13857-201ENSMUST00000139645 173 ntBASIC11.28□□□□□ -0.6
Sox1P53783 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Gm12424-201ENSMUST00000179673 447 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Sox1P53783 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox1P53783 AC122459.4-201ENSMUST00000228654 551 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Gm9790-201ENSMUST00000054148 288 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.28□□□□□ -0.6
Sox1P53783 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox1P53783 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox1P53783 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox1P53783 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.6
Sox1P53783 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Sox1P53783 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Gm14630-201ENSMUST00000118057 246 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm4917-201ENSMUST00000121452 650 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox1P53783 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox1P53783 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm20474-201ENSMUST00000180089 596 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sox1P53783 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox1P53783 Zkscan7-205ENSMUST00000216462 990 ntBASIC11.27□□□□□ -0.61
Sox1P53783 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.27□□□□□ -0.61
Sox1P53783 AC163351.1-201ENSMUST00000225539 737 ntBASIC11.27□□□□□ -0.61
Sox1P53783 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Gm8615-201ENSMUST00000025307 771 ntBASIC11.27□□□□□ -0.61
Sox1P53783 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sox1P53783 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sox1P53783 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox1P53783 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm38220-201ENSMUST00000195774 1447 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Gm45110-201ENSMUST00000205704 1402 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox1P53783 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox1P53783 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.26□□□□□ -0.61
Sox1P53783 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sox1P53783 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm16439-201ENSMUST00000100687 564 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms