Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm4903-201ENSMUST00000210462 405 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Gm8255-201ENSMUST00000218693 305 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Gm7525-201ENSMUST00000219425 454 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox18P43680 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox18P43680 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Sox18P43680 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox18P43680 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox18P43680 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox18P43680 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Mir669p-2-201ENSMUST00000103868 87 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Mir669p-1-201ENSMUST00000103884 87 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm4294-201ENSMUST00000105169 614 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm11475-201ENSMUST00000118482 476 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm14975-201ENSMUST00000118741 664 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm15707-201ENSMUST00000118804 996 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm13460-201ENSMUST00000121274 353 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Esd-ps-201ENSMUST00000170684 847 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC10.89□□□□□ -0.67
Sox18P43680 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Gm26595-201ENSMUST00000181585 484 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC10.89□□□□□ -0.67
Sox18P43680 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.89□□□□□ -0.67
Sox18P43680 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC10.89□□□□□ -0.67
Sox18P43680 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Capsl-202ENSMUST00000226688 739 ntBASIC10.89□□□□□ -0.67
Sox18P43680 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.89□□□□□ -0.67
Sox18P43680 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.89□□□□□ -0.67
Sox18P43680 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 Olfr434-201ENSMUST00000076752 1056 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sox18P43680 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox18P43680 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.89□□□□□ -0.67
Sox18P43680 Gm42852-201ENSMUST00000202649 1379 ntBASIC10.89□□□□□ -0.67
Sox18P43680 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox18P43680 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms