Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6aP27664 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6aP27664 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Gm8492-201ENSMUST00000182375 987 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
Pde6aP27664 Gm38210-201ENSMUST00000191944 809 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6aP27664 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.71□□□□□ -0.37
Pde6aP27664 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pde6aP27664 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pde6aP27664 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.71□□□□□ -0.38
Pde6aP27664 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.71□□□□□ -0.38
Pde6aP27664 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Gm25053-201ENSMUST00000103982 133 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Gm25922-201ENSMUST00000104281 130 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.7□□□□□ -0.38
Pde6aP27664 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.7□□□□□ -0.38
Pde6aP27664 Gm24679-201ENSMUST00000158762 111 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Gm5244-201ENSMUST00000164001 339 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Gm5529-201ENSMUST00000165691 891 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Gm25053-202ENSMUST00000199731 132 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Capsl-202ENSMUST00000226688 739 ntBASIC12.7□□□□□ -0.38
Pde6aP27664 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pde6aP27664 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pde6aP27664 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6aP27664 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.69□□□□□ -0.38
Pde6aP27664 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms