Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hmga1P17095 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hmga1P17095 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmga1P17095 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmga1P17095 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmga1P17095 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmga1P17095 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm25288-201ENSMUST00000122800 265 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Gm28671-201ENSMUST00000187036 692 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Gm40879-201ENSMUST00000220759 612 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Hmga1P17095 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.17□□□□□ -0.62
Hmga1P17095 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmga1P17095 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmga1P17095 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hmga1P17095 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Hmga1P17095 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.16□□□□□ -0.62
Hmga1P17095 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmga1P17095 Mir671-201ENSMUST00000102432 98 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm22594-201ENSMUST00000104251 130 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm12943-201ENSMUST00000119616 210 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm16459-201ENSMUST00000121443 686 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Hmga1P17095 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Mir6387-201ENSMUST00000184042 108 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm43547-201ENSMUST00000197729 328 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmga1P17095 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hmga1P17095 Gm25514-201ENSMUST00000083860 135 ntBASIC11.16□□□□□ -0.62
Hmga1P17095 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms