Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm25148-201ENSMUST00000104611 123 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UbbP0CG49 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm14723-201ENSMUST00000118686 215 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm13461-201ENSMUST00000120980 662 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.54□□□□□ -0.88
UbbP0CG49 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
UbbP0CG49 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm7985-201ENSMUST00000183329 981 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Gm28032-201ENSMUST00000184104 96 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Gm7504-201ENSMUST00000201449 424 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.54□□□□□ -0.88
UbbP0CG49 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.54□□□□□ -0.88
UbbP0CG49 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
UbbP0CG49 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.54□□□□□ -0.88
UbbP0CG49 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UbbP0CG49 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UbbP0CG49 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UbbP0CG49 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UbbP0CG49 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.53□□□□□ -0.88
UbbP0CG49 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
UbbP0CG49 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm23061-201ENSMUST00000102348 116 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm15374-201ENSMUST00000119313 844 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Gm11941-201ENSMUST00000119904 610 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm19246-201ENSMUST00000173599 255 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm9540-201ENSMUST00000188230 478 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
UbbP0CG49 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms