Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
TcraP01849 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
TcraP01849 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
TcraP01849 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC7.99□□□□□ -1.13
TcraP01849 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Gm45416-201ENSMUST00000209713 2201 ntBASIC7.99□□□□□ -1.13
TcraP01849 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
TcraP01849 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TcraP01849 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
TcraP01849 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC7.98□□□□□ -1.13
TcraP01849 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm18222-201ENSMUST00000202416 1387 ntBASIC7.98□□□□□ -1.13
TcraP01849 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Gm43482-201ENSMUST00000202797 1861 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TcraP01849 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm11930-201ENSMUST00000117788 190 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm14109-201ENSMUST00000118814 309 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm14726-201ENSMUST00000120623 896 ntBASIC7.98□□□□□ -1.13
TcraP01849 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC7.98□□□□□ -1.13
TcraP01849 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm34767-201ENSMUST00000191813 1062 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm44651-201ENSMUST00000207343 372 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC7.98□□□□□ -1.13
TcraP01849 Gm21769-201ENSMUST00000211922 111 ntBASIC7.98□□□□□ -1.13
TcraP01849 Gm5186-201ENSMUST00000218781 920 ntBASIC7.98□□□□□ -1.13
TcraP01849 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TcraP01849 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
TcraP01849 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
TcraP01849 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
TcraP01849 AC122367.1-201ENSMUST00000221978 1709 ntBASIC7.98□□□□□ -1.13
TcraP01849 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TcraP01849 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC7.97□□□□□ -1.13
TcraP01849 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms