Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Igh-VJ558P01758 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm5244-201ENSMUST00000164001 339 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm43671-201ENSMUST00000200422 433 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm45118-201ENSMUST00000208928 825 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm31941-201ENSMUST00000209689 350 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm8162-201ENSMUST00000213951 665 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Igh-VJ558P01758 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm15264-201ENSMUST00000118050 502 ntBASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm12337-201ENSMUST00000119634 400 ntBASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Igh-VJ558P01758 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms