Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mir3091-201ENSMUST00000175086 76 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm24368-201ENSMUST00000175388 106 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Mir6396-201ENSMUST00000183603 111 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm19566-201ENSMUST00000199576 610 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm44155-201ENSMUST00000203923 412 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 AC161877.1-201ENSMUST00000227736 699 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm25483-201ENSMUST00000083224 227 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Pck2-205ENSMUST00000226352 2784 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Gm10344-201ENSMUST00000193498 1419 ntBASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col4a6B1AVK5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Col4a6B1AVK5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm8216-201ENSMUST00000117232 601 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm15554-201ENSMUST00000120406 913 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm3635-201ENSMUST00000212314 354 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm17541-201ENSMUST00000080062 525 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Mir705-201ENSMUST00000102058 82 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm44460-201ENSMUST00000196179 129 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm30652-201ENSMUST00000199103 430 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gm44173-201ENSMUST00000204316 132 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col4a6B1AVK5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms