Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm15197-201ENSMUST00000120526 478 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm44329-201ENSMUST00000197469 112 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpne8Q9DC53 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm23771-201ENSMUST00000178702 110 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm9211-201ENSMUST00000182882 975 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm27910-201ENSMUST00000185004 107 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm7255-201ENSMUST00000187371 908 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Platr10-202ENSMUST00000191479 818 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm6677-201ENSMUST00000195100 441 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm9369-201ENSMUST00000196009 733 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm32111-201ENSMUST00000207689 846 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Id2-203ENSMUST00000222667 958 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Cpne8Q9DC53 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpne8Q9DC53 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cpne8Q9DC53 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpne8Q9DC53 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cpne8Q9DC53 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpne8Q9DC53 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Cpne8Q9DC53 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms