Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm25343-201ENSMUST00000157460 107 ntBASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Gm25580-201ENSMUST00000083409 327 ntBASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chmp2aQ9DB34 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Gm4917-201ENSMUST00000121452 650 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Gm39288-201ENSMUST00000210554 446 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chmp2aQ9DB34 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chmp2aQ9DB34 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm25063-201ENSMUST00000104666 94 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms