Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
U2af1Q9D883 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
U2af1Q9D883 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
U2af1Q9D883 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.42□□□□□ -0.1
U2af1Q9D883 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
U2af1Q9D883 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
U2af1Q9D883 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U2af1Q9D883 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm13022-201ENSMUST00000121181 285 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm40414-201ENSMUST00000197608 481 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm43249-201ENSMUST00000200464 458 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.41□□□□□ -0.1
U2af1Q9D883 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U2af1Q9D883 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.4□□□□□ -0.1
U2af1Q9D883 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm6677-201ENSMUST00000195100 441 ntBASIC14.4□□□□□ -0.1
U2af1Q9D883 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
U2af1Q9D883 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
U2af1Q9D883 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 268.5 ms