Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.18□□□□□ -0.62
Trem2Q99NH8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem2Q99NH8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm14892-201ENSMUST00000117636 267 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Mir6979-201ENSMUST00000183927 56 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Spata33-207ENSMUST00000212760 4074 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.17□□□□□ -0.62
Trem2Q99NH8 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem2Q99NH8 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm12337-201ENSMUST00000119634 400 ntBASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm13019-201ENSMUST00000120000 276 ntBASIC11.16□□□□□ -0.62
Trem2Q99NH8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.16□□□□□ -0.62
Trem2Q99NH8 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm5244-201ENSMUST00000164001 339 ntBASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.16□□□□□ -0.62
Trem2Q99NH8 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms