Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm23251-201ENSMUST00000103773 110 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm14028-201ENSMUST00000117434 479 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm15264-201ENSMUST00000118050 502 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm15352-201ENSMUST00000118696 270 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Platr10-202ENSMUST00000191479 818 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm18753-201ENSMUST00000201000 566 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm5468-202ENSMUST00000227851 682 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.36□□□□□ -0.59
Trim60Q8VI40 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim60Q8VI40 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm14395-201ENSMUST00000120494 563 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm18367-201ENSMUST00000176139 600 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm37246-201ENSMUST00000192665 835 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Gm7848-201ENSMUST00000210739 718 ntBASIC11.35□□□□□ -0.59
Trim60Q8VI40 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms