Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc38Q8CDN8 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Gm37608-201ENSMUST00000195696 1880 ntBASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc38Q8CDN8 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm9062-201ENSMUST00000117712 727 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm37905-201ENSMUST00000195310 341 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc38Q8CDN8 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm4917-201ENSMUST00000121452 650 ntBASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc38Q8CDN8 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms