Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp6nlQ80XC3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm8152-201ENSMUST00000120842 637 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm6612-201ENSMUST00000170777 395 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp6nlQ80XC3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Mir1249-201ENSMUST00000116791 98 ntBASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Mir1893-201ENSMUST00000122565 83 ntBASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Mir6953-201ENSMUST00000184745 68 ntBASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Gm45527-201ENSMUST00000211052 774 ntBASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp6nlQ80XC3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms