Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm42859-201ENSMUST00000199572 193 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm42803-201ENSMUST00000201051 451 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm26875-201ENSMUST00000181006 950 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm43106-201ENSMUST00000199485 637 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm5040-201ENSMUST00000218609 800 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Gm7242-201ENSMUST00000221134 705 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Atf7-201ENSMUST00000096143 390 ntBASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx55Q6ZPL9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm12463-201ENSMUST00000118271 849 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm24346-201ENSMUST00000158712 194 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm5244-201ENSMUST00000164001 339 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm17782-201ENSMUST00000174345 880 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm7833-201ENSMUST00000183288 990 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms