Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm14028-201ENSMUST00000117434 479 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm11836-201ENSMUST00000121022 441 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.13□□□□□ -0.47
Ift88Q61371 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm7255-201ENSMUST00000187371 908 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.13□□□□□ -0.47
Ift88Q61371 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm5468-202ENSMUST00000227851 682 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ift88Q61371 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.13□□□□□ -0.47
Ift88Q61371 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.13□□□□□ -0.47
Ift88Q61371 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ift88Q61371 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Ift88Q61371 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Ift88Q61371 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Gm14395-201ENSMUST00000120494 563 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Gm27341-201ENSMUST00000183570 106 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Gm10774-201ENSMUST00000188689 204 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.12□□□□□ -0.47
Ift88Q61371 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.12□□□□□ -0.47
Ift88Q61371 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ift88Q61371 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ift88Q61371 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ift88Q61371 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms